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Pre-Upgrade checks failing due to Corruption in the SSTables

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58
Visibility:
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Category:
storagegrid-webscale
Specialty:
sgrid
Last Updated:

Applies to

  • StorageGRID WebScale 11.3 and Earlier

Issue

  • Upgrade failed with the following error:

An error occurred while upgrading Cassandra: An unknown GDU server error occurred. For more information, see gdu-server.log.

  • gdu-server.log will show the following error:

ERROR [SSTableBatchOpen:1] 2020-06-26 07:19:49,532 DefaultFSErrorHandler.java (line 92) Exiting forcefully due to file system exception on startup, disk failure policy "die"
org.apache.cassandra.io.sstable.CorruptSSTableException: Corrupted: /var/local/rangedb/0/cassandra/storagegrid/s3_usage_delta-4aa921105f5f11e883c72d689ef27dbb/mc-965540-big-Data.db
 at org.apache.cassandra.io.sstable.format.SSTableReader.open(SSTableReader.java:545)
 at org.apache.cassandra.io.sstable.format.SSTableReader.open(SSTableReader.java:387)
 at org.apache.cassandra.io.sstable.format.SSTableReader$3.run(SSTableReader.java:572)
 at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511)
 at java.util.concurrent.FutureTask.run(FutureTask.java:266)
 at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
 at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
 at org.apache.cassandra.concurrent.NamedThreadFactory.lambda$threadLocalDeallocator$0(NamedThreadFactory.java:81)
 at io.netty.util.concurrent.FastThreadLocalRunnable.run(FastThreadLocalRunnable.java:30)
 at java.lang.Thread.run(Thread.java:748)
Caused by: java.io.EOFException: EOF after 252 bytes out of 16708
 at org.apache.cassandra.io.util.RebufferingInputStream.readFully(RebufferingInputStream.java:68)
 at org.apache.cassandra.io.util.RebufferingInputStream.readFully(RebufferingInputStream.java:60)
 at org.apache.cassandra.utils.ByteBufferUtil.read(ByteBufferUtil.java:413)
 at org.apache.cassandra.utils.ByteBufferUtil.readWithShortLength(ByteBufferUtil.java:388)
 at org.apache.cassandra.io.sstable.format.SSTableReader.buildSummary(SSTableReader.java:860)
 at org.apache.cassandra.io.sstable.format.SSTableReader.load(SSTableReader.java:785)
 at org.apache.cassandra.io.sstable.format.SSTableReader.load(SSTableReader.java:749)
 at org.apache.cassandra.io.sstable.format.SSTableReader.open(SSTableReader.java:530)
 ... 9 common frames omitted

 

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